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Rothmund-Thomson Syndrome: novel pathogenic mutations and frequencies of variants in the RECQL4 and USB1 (C16orf57) gene.

机译:Rothmund-Thomson综合征:RECQL4和USB1(C16orf57)基因中的新型致病突变和变体频率。

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摘要

BACKGROUND\ud\udPoikiloderma is defined as a chronic skin condition presenting with a combination of punctate atrophy, areas of depigmentation, hyperpigmentation and telangiectasia. In a variety of hereditary syndromes such as Rothmund-Thomson syndrome (RTS), Clericuzio-type poikiloderma with neutropenia (PN) and Dyskeratosis Congenita (DC), poikiloderma occurs as one of the main symptoms. Here, we report on genotype and phenotype data of a cohort of 44 index patients with RTS or related genodermatoses.\ud\udMETHODS\ud\udDNA samples from 43 patients were screened for variants in the 21 exons of the RECQL4 gene using PCR, SSCP-PAGE analysis and/or Sanger sequencing. Patients with only one or no detectable mutation in the RECQL4 gene were additionally tested for variants in the 8 exons of the USB1 (C16orf57) gene by Sanger sequencing. The effect of novel variants was evaluated by phylogenic studies, single-nucleotide polymorphism (SNP) databases and in silico analyses.\ud\udRESULTS\ud\udWe identified 23 different RECQL4 mutations including 10 novel and one homozygous novel USB1 (C16orf57) mutation in a patient with PN. Moreover, we describe 31 RECQL4 and 8 USB1 sequence variants, four of them being novel intronic RECQL4 sequence changes that may have some deleterious effects on splicing mechanisms and need further evaluation by transcript analyses.\ud\udCONCLUSION\ud\udThe current study contributes to the improvement of genetic diagnostic strategies and interpretation in RTS and PN that is relevant in order to assess the patients' cancer risk, to avoid continuous and inconclusive clinical evaluations and to clarify the recurrence risk in the families. Additionally, it shows that the phenotype of more than 50% of the patients with suspected Rothmund-Thomson disease may be due to mutations in other genes raising the need for further extended genetic analyses.
机译:背景\ ud \ udPoikiloderma定义为一种慢性皮肤病,表现为点状萎缩,色素沉着,色素沉着过度和毛细血管扩张的组合。在多种遗传性综合征中,例如Rothmund-Thomson综合征(RTS),克莱里库齐奥型中性粒细胞减少症(PN)和先天性角化病(DC),中风是主要症状之一。在此,我们报告了44名患有RTS或相关基因皮肤病的索引患者队列的基因型和表型数据。使用PCR,SSCP从RECQL4基因的21个外显子中筛选了来自43位患者的\ ud \ udMETHODS \ ud \ udDNA样本中的变体。 -PAGE分析和/或Sanger测序。还通过Sanger测序对RECQL4基因中只有一个或没有可检测到突变的患者的USB1(C16orf57)基因的8个外显子进行了变异测试。通过系统发育研究,单核苷酸多态性(SNP)数据库和计算机分析来评估新型变体的效果。\ ud \ udRESULTS \ ud \ ud我们鉴定了23种不同的RECQL4突变,包括10个新的和一个纯合的新USB1(C16orf57)突变。 PN患者。此外,我们描述了31个RECQL4和8个USB1序列变体,其中四个是新颖的内含RECQL4序列变化,可能对剪接机制产生有害影响,需要通过转录本分析进一步评估。\ ud \ ud结论\ ud \ ud为了评估患者的癌症风险,避免持续和不确定的临床评估以及明确家庭中的复发风险,RTS和PN中遗传诊断策略和解释的改进是相关的。此外,它表明超过50%的疑似Rothmund-Thomson病患者的表型可能是由于其他基因的突变引起的,因此需要进一步扩展遗传分析。

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